Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927126.1_cds_XP_016475036.1_66999
CDS Infomation

[gene=LOC107796747] [db_xref=GeneID:107796747] [protein=probable 2-oxoglutarate/Fe(II)-dependent dioxygenase] [protein_id=XP_016475036.1] [location=complement(join(7284..7538,7624..7951,8384..8862))] [gbkey=CDS]
Sequence

ATGGGAGAAGTTGACTCAGCTTTCATCCAAGATGTTGAACACAGGCCTAAATTGACCATA
ACTGAAGCAGAGGGCATTCCAGTGATTGATCTCTTAATACTCAACTCTTCAGATATCTCC
ACTGAGAAAAATTGCAAGGAATTATCAAGTCTAGTAGCTGAGGTGAAAGATGCATGCAAG
AAATGGGGATTCTTCCAAGTGATCAATCATGGGGTGTCCTTAGAGTACAGGGAAAAGATT
GAGTTGGGATCAAGAAAGTTCTTTGCTTTGTCTAAAGAGGAAAAGAGAAAAGTGAAGAGA
GATGAGCTGAATTCAATGGGATATTATGATACTGAGCTCACCAAAAATGTTAGGGACTGG
AAAGAAGTCTTTGATTTTACTGTGGAGAATCCAACTGTTGTACCACTTTCTCATGACCCT
GATGACAAGGAGCTCAAGGAGTTGCACAATCAATGGCCTGAGTACCCTCCAGAATTAAGG
GATGTTTGTGAAAAGTATGTTCAAGAAATGCAAAAGCTGTCTTACAAGTTACTGGAACTG
ATTTCTCTCAGCTTAGACTTGCCAGCAAAAAGGTTGAATGGGTTCTTTAAAGACCAAACT
AGTTTCGTGAGGCTGAATCATTATCCTCCTTGCCCTATCCCTCATTTGGCTTTAGGAGTT
GGTAGGCACAAAGATGCTGGTTCACTAACTATTCTGGCTCAAGATGATATAGGAGGGCTT
GAAGTGAAGAGAAAAACTGATGGAGAATGGATTAGAGTTAAACCTACTCCTGATGCTTAC
ATTATAAATGTTGGTGACACTATCCAGGTTTGGAGCAACGATGAATATGAGAGTGTGGAA
CACCGGGTGGTGGTGAACTCAGAGAGGGAAAGGTTTTCAATTCCATTCTTTCTCAATCCA
TCACACTATACATGGATAGAACCCTTGGAGAAGCTTGTCAATGCGGAAAACCCTGCAAAG
TATAAGGCTTATAACTGGGGAATGTTTTTCACTCATCGGAAGAACAGCAATTTCACCAAG
CGTGATGATGAAAACCTTCAAATTCACCATTTTAAGGCTTGA

Peptide Sequence

PEP ID

XP_016475036.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Nicotiana tabacum]
Sequence

MGEVDSAFIQDVEHRPKLTITEAEGIPVIDLLILNSSDISTEKNCKELSSLVAEVKDACK
KWGFFQVINHGVSLEYREKIELGSRKFFALSKEEKRKVKRDELNSMGYYDTELTKNVRDW
KEVFDFTVENPTVVPLSHDPDDKELKELHNQWPEYPPELRDVCEKYVQEMQKLSYKLLEL
ISLSLDLPAKRLNGFFKDQTSFVRLNHYPPCPIPHLALGVGRHKDAGSLTILAQDDIGGL
EVKRKTDGEWIRVKPTPDAYIINVGDTIQVWSNDEYESVEHRVVVNSERERFSIPFFLNP
SHYTWIEPLEKLVNAENPAKYKAYNWGMFFTHRKNSNFTKRDDENLQIHHFKA

Transcript Sequence

Gene sequence data has not been registered.